Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A2YZ24

dbSWEET id: dbswt_931

Accession:   A2YZ24

Uniprot status:   Reviewed

Organism:   Oryza sativa

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Oryzoideae ⇒ Oryzeae ⇒ Oryzinae ⇒ Oryza.

Sequence Information back to top


Sequence length:   266

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   LNMN           CVV:   440       CHI:   -1.3

Fasta sequence:

>sp|A2YZ24|SWT7B_ORYSI|Reviewed|Oryza_sativa|266
MVSPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFY
GLPIVHPNSILVVTINGIGLIIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVVLGV
LLGAHTHQRRSLIVGILCAIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSVVSFLNGLCW
TSYALIRLDIFITIPNGLGVLFALMQLILYAIYYRTTPKKQDKNLELPTVAPVAKDTSIV
TPVSKDDDVVDGGNASHVTINITIEP

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   215

Alignment file: A2YZ24.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A2YZ24_inward.pdb

Procheck score ⇒ Ramachandran plot: 95.2% favored    2.6% allowed    1.1% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A2YZ24_outward.pdb

Procheck score ⇒ Ramachandran plot: 94.7% favored    4.8% allowed    .5% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A2YZ24_occluded.pdb

Procheck score ⇒ Ramachandran plot: 94.2% favored    4.2% allowed    1.1% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0005887 - integral component of plasma membrane

GO:0051119 - sugar transmembrane transporter activity

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur