Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A1C4CD87

dbSWEET id: dbswt_1626

Accession:   A0A1C4CD87

Uniprot status:   Unreviewed

Organism:   Gilliamella

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Gammaproteobacteria ⇒ Orbales ⇒ Orbaceae ⇒ Gilliamella.

Sequence Information back to top


Sequence length:   87

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|A0A1C4CD87|A0A1C4CD87_9GAMM|Unreviewed|Gilliamella|87
MHLSPKAFRILGIIATIASLGMYVSYIPQIIDNLHGFKSNPTQPLAASINCTLWVCYGLL
REKKDWPIAIANSPGVFFGLIAFFTAL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   12     Model end:   88

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A1C4CD87_inward.pdb    Alignment file: A0A1C4CD87_inw.pir

Procheck score ⇒ Ramachandran plot: 93.0% favored    6.2% allowed    .8% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A1C4CD87_outward.pdb    Alignment file: A0A1C4CD87_out.pir

Procheck score ⇒ Ramachandran plot: 90.6% favored    7.8% allowed    .0% week    1.6% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A1C4CD87_occluded.pdb    Alignment file: A0A1C4CD87_occ.pir

Procheck score ⇒ Ramachandran plot: 92.2% favored    7.0% allowed    .0% week    .8% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur