Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A1C4A1X9

dbSWEET id: dbswt_1625

Accession:   A0A1C4A1X9

Uniprot status:   Unreviewed

Organism:   Lactobacillus apis

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Bacilli ⇒ Lactobacillales ⇒ Lactobacillaceae ⇒ Lactobacillus.

Sequence Information back to top


Sequence length:   105

Substrate Binding Site:   TNTN           CVV:   378       CHI:   -8.4

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|A0A1C4A1X9|A0A1C4A1X9_9LACO|Unreviewed|Lactobacillus apis| 105
MLLSEELHNDKIVRQGDEAMKLEKAMTILGWVASVTAIIMYVSYIPQIISNLHGVKGNPI
QPLATAINTLLWVIYGLFKEDRDIPIAACNAIGFVFGLIAFFTAL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   30     Model end:   106

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A1C4A1X9_inward.pdb    Alignment file: A0A1C4A1X9_inw.pir

Procheck score ⇒ Ramachandran plot: 90.8% favored    6.9% allowed    2.3% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A1C4A1X9_outward.pdb    Alignment file: A0A1C4A1X9_out.pir

Procheck score ⇒ Ramachandran plot: 91.5% favored    7.7% allowed    .8% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A1C4A1X9_occluded.pdb    Alignment file: A0A1C4A1X9_occ.pir

Procheck score ⇒ Ramachandran plot: 90.8% favored    6.2% allowed    1.5% week    1.5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur