Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A1C3EZD8

dbSWEET id: dbswt_1994

Accession:   A0A1C3EZD8

Uniprot status:   Unreviewed

Organism:   Rickettsia

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Alphaproteobacteria ⇒ Rickettsiales ⇒ Rickettsiaceae ⇒ Rickettsieae ⇒ Rickettsia.

Sequence Information back to top


Sequence length:   88

Substrate Binding Site:   LNLN           CVV:   440       CHI:   0.6

Selectivity Filter:   MAMA           CVV:   382       CHI:   7.4

Fasta sequence:

>tr|A0A1C3EZD8|A0A1C3EZD8_9RICK|Unreviewed|Rickettsia|88
MSPKFMKFYEKYMTVVGTVGNFMFYFQAHKIFTCKSVASVSLPAFTISAVALSSWLLYGI
LIKNTPIIIANIVDFIGALLVLVAIILH

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   11     Model end:   87

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A1C3EZD8_inward.pdb    Alignment file: A0A1C3EZD8_inw.pir

Procheck score ⇒ Ramachandran plot: 94.9% favored    3.7% allowed    1.5% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A1C3EZD8_outward.pdb    Alignment file: A0A1C3EZD8_out.pir

Procheck score ⇒ Ramachandran plot: 94.1% favored    3.7% allowed    2.2% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A1C3EZD8_occluded.pdb    Alignment file: A0A1C3EZD8_occ.pir

Procheck score ⇒ Ramachandran plot: 95.6% favored    4.4% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur