Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A1B2U6A8

dbSWEET id: dbswt_1607

Accession:   A0A1B2U6A8

Uniprot status:   Unreviewed

Organism:   Flavobacterium johnsoniae

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Bacteroidetes ⇒ Flavobacteriia ⇒ Flavobacteriales ⇒ Flavobacteriaceae ⇒ Flavobacterium.

Sequence Information back to top


Sequence length:   87

Substrate Binding Site:   ININ           CVV:   440       CHI:   2

Selectivity Filter:   SGSG           CVV:   242       CHI:   -2.4

Fasta sequence:

>tr|A0A1B2U6A8|A0A1B2U6A8_FLAJO|Unreviewed|Flavobacterium johnsoniae|87
MNYIDIIGLFAGACVTISTIPQILKVWKTKKVKQISLKMFGTLTFGIAVWVIYGILKNDL
PIIITNSISLILNLTMVYFIIYFEKEQ

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   82

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A1B2U6A8_inward.pdb    Alignment file: A0A1B2U6A8_inw.pir

Procheck score ⇒ Ramachandran plot: 95.6% favored    2.9% allowed    1.5% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A1B2U6A8_outward.pdb    Alignment file: A0A1B2U6A8_out.pir

Procheck score ⇒ Ramachandran plot: 94.9% favored    5.1% allowed    .0% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A1B2U6A8_occluded.pdb    Alignment file: A0A1B2U6A8_occ.pir

Procheck score ⇒ Ramachandran plot: 98.5% favored    1.5% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur