Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A158PD21

dbSWEET id: dbswt_1106

Accession:   A0A158PD21

Uniprot status:   Unreviewed

Organism:   Angiostrongylus costaricensis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Strongylida ⇒ Metastrongyloidea ⇒ Angiostrongylidae ⇒ Angiostrongylus.

Sequence Information back to top


Sequence length:   292

Substrate Binding Site:   GTWN           CVV:   400       CHI:   -5.5

Selectivity Filter:   LGDV           CVV:   368       CHI:   4.1

Fasta sequence:

>tr|A0A158PD21|A0A158PD21_ANGCS|Unreviewed|Angiostrongylus_costaricensis|292
MFEVFTDGFSFLNLLSLAAFFTTVGLFFCGIPICRQIWKRKDTTEISGAPFLMGVLGGCC
WMTYGYLKKDHTVLVVTGCQVILYSSYSIFYWLMSKEKLFITIKVSVVLAMCAALIGSVK
LFGMKVFHPLGIVCMTLNIGDFAAPLAGLRVVIRRGATSTLPLPLCIANFMVSSEWFLYG
LLVRDIYLITPNGIGSALAVGQLFLFIILPRKPGQRSLIARICGCCGPSEKEIDLEAPIK
EIMPEMDGSEQKSEEHFTRALRWSKKMIANVNTVAEELEHVIGMASIHHQDQ

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   211

Alignment file: A0A158PD21.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A158PD21_inward.pdb

Procheck score ⇒ Ramachandran plot: 91.6% favored    5.6% allowed    2.8% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A158PD21_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.8% favored    5.6% allowed    .6% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A158PD21_occluded.pdb

Procheck score ⇒ Ramachandran plot: 88.8% favored    8.4% allowed    1.1% week    1.7% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur