Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A124SE28

dbSWEET id: dbswt_747

Accession:   A0A124SE28

Uniprot status:   Unreviewed

Organism:   Cynara cardunculus

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ asterids ⇒ campanulids ⇒ Asterales ⇒ Asteraceae ⇒ Carduoideae ⇒ Cardueae ⇒ Carduinae ⇒ Cynara.

Sequence Information back to top


Sequence length:   256

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   LNMC           CVV:   430       CHI:   4.7

Fasta sequence:

>tr|A0A124SE28|A0A124SE28_CYNCS|Unreviewed|Cynara_cardunculus|256
MGAVSILHTVFGIFGDATGLFLFLAPTITFKRILTNKSTEQFSGIPYPMTLLNCLLSAWY
GLPFVSKNNTLVTVINGTGAGIEAIYVLIFIIYAPKKEKAKVLGLVTFVLAAFSTVALVS
VFALHGKSRRYFCGFAAAIFSVIMYGSPLSIMRTVIKTKSVEFMPFFLSLFVFLCGTSWF
IFGLLGNDPFVYVCNGFGSVLGALQLILYAIYRKNKGQKDEKAAAKDGGSTMEMGLVKRP
DKATVTAIQPPENTRV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   214

Alignment file: A0A124SE28.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A124SE28_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.0% favored    3.3% allowed    2.2% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A124SE28_outward.pdb

Procheck score ⇒ Ramachandran plot: 96.2% favored    2.7% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A124SE28_occluded.pdb

Procheck score ⇒ Ramachandran plot: 94.0% favored    5.4% allowed    .5% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur