Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A103XR16

dbSWEET id: dbswt_785

Accession:   A0A103XR16

Uniprot status:   Unreviewed

Organism:   Cynara cardunculus

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ asterids ⇒ campanulids ⇒ Asterales ⇒ Asteraceae ⇒ Carduoideae ⇒ Cardueae ⇒ Carduinae ⇒ Cynara.

Sequence Information back to top


Sequence length:   265

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   LNMN           CVV:   440       CHI:   -1.3

Fasta sequence:

>tr|A0A103XR16|A0A103XR16_CYNCS|Unreviewed|Cynara_cardunculus|265
MASHDFARSVLGVIASVLVSVSVTVVFFPLGNVISIILFLSTVPTFYKIWKKKSVEQYSP
VPYLVTFVNCGLWIFYGLPFVHPHSLLVTTTNGAGIVIESVYLLLFIIYSDSKKRIRVIL
VLIMEIIFLGVLFALTLTLAHGTKLRSAIIGSICIAGNIMMYASPLSVMKMVIKTKSVEY
MPFLLSLFCFANGVCWFSYGLIRFDPFVVAPNGIGALFALAQLVLYAIFYKSTQRIMAER
QAKGELNLGNVTPSSRSNNSQLEFV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   17     Model end:   231

Alignment file: A0A103XR16.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A103XR16_inward.pdb

Procheck score ⇒ Ramachandran plot: 93.7% favored    4.8% allowed    1.6% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A103XR16_outward.pdb

Procheck score ⇒ Ramachandran plot: 95.2% favored    4.2% allowed    .5% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A103XR16_occluded.pdb

Procheck score ⇒ Ramachandran plot: 93.7% favored    5.3% allowed    .5% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur