Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0V1FLL5

dbSWEET id: dbswt_1287

Accession:   A0A0V1FLL5

Uniprot status:   Unreviewed

Organism:   Trichinella pseudospiralis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Enoplea ⇒ Dorylaimia ⇒ Trichocephalida ⇒ Trichinellidae ⇒ Trichinella.

Sequence Information back to top


Sequence length:   921

Substrate Binding Site:   SNVN           CVV:   370       CHI:   -3.6

Selectivity Filter:   LGCI           CVV:   382       CHI:   10.4

Fasta sequence:

>tr|A0A0V1FLL5|A0A0V1FLL5_TRIPS|Unreviewed|Trichinella_pseudospiralis|921
MNSTSVPLKEQLQIFYKDFPKSLLRHLNFFDLLCTSIGINIFFLGLAALSNIRRWKKRGK
SDQDFFLPFILAWIGSFLWTVYGFLVTNWQIELVNGYLTAANSVVLIALYIYRIRKVQVA
FMNFSMCHHILKFKKSLAAVIFITGLAAGSLLLLLTQLPNITSVHLVGSICSCMQIGCAC
TMLYMIVLAIKKKRIDFIPFPPVAQIFNIEFQVTLYSIWIEDFYLLISNGIFMTIDGLVF
LLFFIYPSEPTTSLAEANQSLSTLCYLVCTGRCVGVDHWFVCSRLVKHMPLSARCPLQPE
SMFRESKTCQSIPPRDQHLYVASNNNGRYRHSTGNAADAGQASSSTKLTQVKPRINLSLD
SDDNTMKLQKSRADNSEYFSKSESDCTSDNGSRLNILPVRRKSSKRLLPPTPVCIANDLK
ESVIDSEDDSYPSKESQLTDELYSSDICDSSTPSSTGDATNFLTIHSSRRRSRILPTAPI
PQVSRRSVELSLSPRYGTQNAEDFLKPPNEAERRHSASNVLHASKIVSSRKPSIDSESLE
SFFDKCSLSSSKSGQAKADDNESHTSAYLLHKKSSTKLATSRKVSRNASSIEIRPIYGKT
PPASSSVPDIAKQRIVTPVGQEAKRGSWPGLLSKEGTTFSSGFGFLHFSIQYFPVRKRLR
VLVIKAEGLILPIKRDIVLNTFLKIFLSPGKQQKQRSRRLIKHAEDTVYNEEFFFVNITE
EDIKTKSVEIRLCNHATKQFHNDRVIGEVKLPLHAVPQLWSKQEIHFIRNLSPKQVKKLG
RIHLGITLEASARRLTINIAKIDDLPKYGIYGPPDPYVRITLNQNQVTQSKQTRTLKNTC
NPVFREAVMFLVSVGEEDLENTSLVVSVMDALRPSCPSSVIGEVILSKSAEEKSCAEQWR
MMLASPGKEIKASHTLENPSE

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   23     Model end:   248

Alignment file: A0A0V1FLL5.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0V1FLL5_inward.pdb

Procheck score ⇒ Ramachandran plot: 87.4% favored    9.7% allowed    2.9% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0V1FLL5_outward.pdb

Procheck score ⇒ Ramachandran plot: 90.3% favored    8.3% allowed    1.0% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0V1FLL5_occluded.pdb

Procheck score ⇒ Ramachandran plot: 85.9% favored    10.7% allowed    2.4% week    1.0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF00168: C2. PF03083: MtN3_slv 

Interpro:   IPR000008: C2_dom. IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur