Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0V1DWG6

dbSWEET id: dbswt_1286

Accession:   A0A0V1DWG6

Uniprot status:   Unreviewed

Organism:   Trichinella pseudospiralis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Enoplea ⇒ Dorylaimia ⇒ Trichocephalida ⇒ Trichinellidae ⇒ Trichinella.

Sequence Information back to top


Sequence length:   893

Substrate Binding Site:   SNVP           CVV:   364       CHI:   -1.7

Selectivity Filter:   LGGI           CVV:   344       CHI:   7.5

Fasta sequence:

>tr|A0A0V1DWG6|A0A0V1DWG6_TRIPS|Unreviewed|Trichinella_pseudospiralis|893
MNLFHICNAINCTNKTPNCSNKQLQIFYKDFPKSLLRHLNFFDLLCTSIGINIFFLGLAA
LSNIRRWKKRGKSDQDFFLPFILAWIGSFLWTVYGFLVTNWQIELVNGYLTAANSVVLIA
LYIYRIRKVQKSLAAVIFITGLAAGSLLLLLTQLPNITSVHLVGSICSCMQIGCACTMLY
MIVLAIKKKRIDFIPFPPVAQIFNIEFQVTLYSIWIEDFYLLVKPDRRHWLKLTNLLARY
AICRCVGVDHWFVCSRLVKHMPLSAHCPLQPESMFRESKTCQSIPPRDQHLYVASNNNGR
YRHSTGNAADAGQASSSTKLTQVKPRINLSLDSDDNTMKLQKSRADNSEYFSKSESDCTS
DNGSRLNILPVRRKSSKRLLPPTPVCIANDLKESVIDSEDDSYPSKESQLTDELYSSDIC
DSSTPSSTGDATNFLTIHSSRRRSRILPTAPIPQVSRRSVELSLSPRYGTQNAEDFLKPP
NEAERRHSASNVLHASKIVSSRKPSIDSESLESFFDKCSLSSSKSGQAKADDNESHTSAY
LLHKKSSTKPATSRKVSRNASSIEIRPIYGKTPPASSSVPDIAKQRIVTPVGQEAKRGSW
PGLLPKEGTTFSSGFGFLHFSIQYFPVRKRLRVLVIKAEGLILPIKRDIVLNTFLKIFLS
PGKQQKQRSRRLIKHAEDTVYNEEFFFVNITEEDIKTKSVEIRLCNHATKQFHNDRVIGE
VKLPLHAVPQLWSKQEIHFIRNLSPKQVKKLGRIHLGITLEASARRLTINIAKIDDLPKY
GIYGPPDPYVRITLNQNQVTQSKQTRTLKNTCNPVFREAVMFLVSVGEEDLENTSLVVSV
MDALRPSCPSSVIGEVILSKSAEEKSCAEQWRMMLASPGKEIKASHTLENPSE

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   35     Model end:   245

Alignment file: A0A0V1DWG6.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0V1DWG6_inward.pdb

Procheck score ⇒ Ramachandran plot: 84.9% favored    11.5% allowed    2.6% week    1.0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0V1DWG6_outward.pdb

Procheck score ⇒ Ramachandran plot: 87.0% favored    10.4% allowed    1.0% week    1.6% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0V1DWG6_occluded.pdb

Procheck score ⇒ Ramachandran plot: 89.6% favored    9.4% allowed    1.0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF00168C2.: PF03083: PF03083: MtN3_slv. 

Interpro:   IPR000008: C2_dom. IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur