Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0V1AUW9

dbSWEET id: dbswt_1283

Accession:   A0A0V1AUW9

Uniprot status:   Unreviewed

Organism:   Trichinella spiralis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Enoplea ⇒ Dorylaimia ⇒ Trichocephalida ⇒ Trichinellidae ⇒ Trichinella.

Sequence Information back to top


Sequence length:   909

Substrate Binding Site:   SNVN           CVV:   398       CHI:   3.7

Selectivity Filter:   AGGI           CVV:   287       CHI:   5.5

Fasta sequence:

>tr|A0A0V1AUW9|A0A0V1AUW9_TRISP|Unreviewed|Trichinella_spiralis|909
MNSTSMPLEKQLQILYKDFPKSLLRHLNFLDLLCTSIGINIFFLGLAALSNIRRWKMRGK
SDQDFFLPFILAWIGSFLWTVYGFLVTNWQIELVNGYLTAANSVVLIALYIYRIRKKSLA
AVIFITGLATGSLLLLLTQLPNITSVHLVGSICSCIQIGCACTMLYMIVLAIKKKRIDFI
PFPPVAQIFNIEFQVTLYSIWIEDFYLLISNGIFMTIDGLVFLLFFIYPSEPTTSLAEAN
QSLSTYAIWFALGEKRSSNRCVGVDHWFVCSRLVKHMPLSARCLLQPESMFRESKTCQSI
PPRDQHLYVASNNNGRYRHSTGNAADAGQASSSTKLTQVKPRINLSLDSDDNSMKLHKSH
ADNSEYFSKSESDCAFDNGNRLNILPVRRKSSKRLLPPTPVCIANDLKESVIDSEDDSYP
SKESQLTDELYSSDICDSSTPSSTGDATNFLTIHSSRRRSRILPTAPMPQISRRSVELSL
SPRYGTHNAEDFLKPPNEAERRHSASNVLHASKMVITRKPSIDSESLESFFDKCSLSSSK
SRQAKADDNESHTSAHLLHKKTSTKLASSRKVSRNASSIEIRPIYGKIPPASSSVPDIAK
QRIVTPVGQEAKRGSWPGLLSKEGTSFSSGFGFLHFSIQYFPVRKRLRVLVIKAEGLILP
TKRDIVLNTFLKIFLSPGKQQKQRSRRLIKHAEDAVYNEEFFFVNITEDDIKTKSVEIRL
CNHATKQFHNDRVIGEVKLPLHAVPQLWSKQEIHFIRNLSPKQVKKLGRIHLGITLEASA
RRLTINVAKIDDLPKYGIYGPPDPYVRITLNQKQVTQSKQTRTLKNTCNPVFREAVMFLV
SVGEEDLENTSLVVSVMDAIRPSCPSSVIGEIILSKGAEEKSCAEQWRMMLASPGKEIKA
SHTLKNPSE

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   27     Model end:   230

Alignment file: A0A0V1AUW9.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0V1AUW9_inward.pdb

Procheck score ⇒ Ramachandran plot: 90.2% favored    7.6% allowed    .5% week    1.6% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0V1AUW9_outward.pdb

Procheck score ⇒ Ramachandran plot: 90.2% favored    8.7% allowed    .5% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0V1AUW9_occluded.pdb

Procheck score ⇒ Ramachandran plot: 90.2% favored    7.1% allowed    2.7% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF00168: C2. PF03083: MtN3_slv 

Interpro:   IPR000008: C2_dom. IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur