Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0V0ZZB3

dbSWEET id: dbswt_1282

Accession:   A0A0V0ZZB3

Uniprot status:   Unreviewed

Organism:   Trichinella patagoniensis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Enoplea ⇒ Dorylaimia ⇒ Trichocephalida ⇒ Trichinellidae ⇒ Trichinella.

Sequence Information back to top


Sequence length:   895

Substrate Binding Site:   SNVL           CVV:   398       CHI:   3.7

Selectivity Filter:   LGGI           CVV:   344       CHI:   7.5

Fasta sequence:

>tr|A0A0V0ZZB3|A0A0V0ZZB3_9BILA|Unreviewed|Trichinella_patagoniensis|895
MNSTSVPLEKQLQILYKDFPKSLLRHLNFFDLLCTSIGINIFFLGLAALSNIRRWKMRGK
SDQDFFLPFILAWIGSFLWTVYGFLVTNWQIELVNGYLTAANSVVLIALYIYRIRKVQFL
FMNFSMYHILQFKKSLAAVIFITGLATGSLLLLLAQLPNITSVHLVGSICSCIQIGCACT
MLYMIVLAIKKKRIDFIPFPPVAQIFNIEFQVTLYSIWIEDFYLLTSLAEANQSLSTYAI
WFALVDALVLIIGLFNSRLVKHMPLSARCPLQPESMFRESKTCQSIPPRDQHLYVASNNN
GRYRHSTGNAADAGQASSSTKLTQVKPRINLSLDSDDNSMKLQKSHGDNSEYFSKSESDC
ASDNGNRLNILPVRRKSSKRLLPPTPVCIANDLKESVIDSEDDSYPSKESQLTDELYSSD
ICDSSTPSSTGDATNFLTIHSSRRRSRILPTAPMPQISRRSVELSLSPRYGTHNAEDFLK
PPNEAERRHSASNVLHASKMVSTRKPSIDSESLESFFDKCSLSSSKSRQAKADDNESHTS
AHLLHKKTSTKLASSRKVSRNASSIEIRPIYGKIPPASSSVPDIAKQRIVTPVGQEAKRG
SWPGLLSKEGTSFSSGFGFLHFSIQYFPVRKRLRVLVIKAEGLILPTKRDIVLNTFLKIF
LSPGKQQKQRSRRLIKHAEDAVYNEEFFFVNITEDDIKTKSVEIRLCNHAAKQFHNDRVI
GEVKLPLHAVPQLWSKQEIHFIRNLSPKQVKKLGRIHLGITLEASARRLTINVAKIDDLP
KYGIYGPPDPYVRITLNQKQVTQSKQTRTLKNTCNPVFKEAVMFLVSVGEEDLENTSLVV
SVMDALRPSCPSSVIGEIILSKGAEEKSCAEQWRMMLASPGKEIKASHTLKSPSE

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   23     Model end:   247

Alignment file: A0A0V0ZZB3.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0V0ZZB3_inward.pdb

Procheck score ⇒ Ramachandran plot: 87.4% favored    10.1% allowed    1.0% week    1.4% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0V0ZZB3_outward.pdb

Procheck score ⇒ Ramachandran plot: 88.4% favored    10.6% allowed    .5% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0V0ZZB3_occluded.pdb

Procheck score ⇒ Ramachandran plot: 89.9% favored    8.7% allowed    .5% week    1.0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF00168: C2. PF03083: MtN3_slv. 

Interpro:   IPR000008: C2_dom. IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur