Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0V0HPH6

dbSWEET id: dbswt_463

Accession:   A0A0V0HPH6

Uniprot status:   Unreviewed

Organism:   Solanum chacoense

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ asterids ⇒ lamiids ⇒ Solanales ⇒ Solanaceae ⇒ Solanoideae ⇒ Solaneae ⇒ Solanum.

Sequence Information back to top


Sequence length:   314

Substrate Binding Site:   TNWN           CVV:   448       CHI:   -8.6

Selectivity Filter:   MSMN           CVV:   417       CHI:   -0.5

Fasta sequence:

>tr|A0A0V0HPH6|A0A0V0HPH6_SOLCH|Unreviewed|Solanum_chacoense|314
MANFSFILGIIGNVISILMFAAPIKTFKRIMKKKSTEDFKGIPYITTLLSTCLWTFYGLL
KPGGLLVVTVNGTGAIFHIIYVTLFLIYAPKPLKIQSMKLVAIINIAFLGAVIAITLLAV
HGTTRLTLVGFLCAALNIGMYAAPLAATRTVIKMKSVEYMPFFLSFFQFLNGGVWTVYAV
LVKDYFIGVPNGIGFILGAAQLILYFMYYKSSPTKSTEEKGSAHLMKREIQMKDVNGAHE
NENNRNLHKGKSLPKPSLVRQYSVRLVKTLSNTPSSLGSHNVNDIEKGLKEAHXISNCIK
EIGPTFFFWENYLS

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   210

Alignment file: A0A0V0HPH6.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0V0HPH6_inward.pdb

Procheck score ⇒ Ramachandran plot: 95.0% favored    3.9% allowed    .6% week    .6% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0V0HPH6_outward.pdb

Procheck score ⇒ Ramachandran plot: 95.6% favored    2.8% allowed    1.1% week    .6% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0V0HPH6_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.3% favored    6.1% allowed    1.1% week    .6% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur