Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0R1J6T0

dbSWEET id: dbswt_1459

Accession:   A0A0R1J6T0

Uniprot status:   Unreviewed

Organism:   Lactobacillus farciminis

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Bacilli ⇒ Lactobacillales ⇒ Lactobacillaceae ⇒ Lactobacillus.

Sequence Information back to top


Sequence length:   93

Substrate Binding Site:   SNSN           CVV:   338       CHI:   -8.6

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|A0A0R1J6T0|A0A0R1J6T0_9LACO|Unreviewed|Lactobacillus farciminis|93
MEQTKIITKKKDGLFYVSRLATIFSILMYVSYIPQIMDNLNGSQGNPIQPLCAALNSTLW
VSYGLLKKKHDWPVVIANLPGIVLGLVTFFTSL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   18     Model end:   94

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A0R1J6T0_inward.pdb    Alignment file: A0A0R1J6T0_inw.pir

Procheck score ⇒ Ramachandran plot: 91.4% favored    7.8% allowed    .0% week    .8% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A0R1J6T0_outward.pdb    Alignment file: A0A0R1J6T0_out.pir

Procheck score ⇒ Ramachandran plot: 92.2% favored    7.0% allowed    .8% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A0R1J6T0_occluded.pdb    Alignment file: A0A0R1J6T0_occ.pir

Procheck score ⇒ Ramachandran plot: 92.2% favored    7.0% allowed    .8% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur