Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0P6RFM8

dbSWEET id: dbswt_1433

Accession:   A0A0P6RFM8

Uniprot status:   Unreviewed

Organism:   Phaeobacter

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Alphaproteobacteria ⇒ Rhodobacterales ⇒ Rhodobacteraceae ⇒ Phaeobacter.

Sequence Information back to top


Sequence length:   82

Substrate Binding Site:   VNVN           CVV:   402       CHI:   1.4

Selectivity Filter:   CTCT           CVV:   358       CHI:   3.6

Fasta sequence:

>tr|A0A0P6RFM8|A0A0P6RFM8_9RHOB|Unreviewed|Phaeobacter|82
MELYVGYIAAFMGTICWLPQAWKAWASRDTSGLSLPANLMFLLTVSLWFVYGLMVGDWPI
IIANICAILIVLSIVAAKLRYK

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   3     Model end:   80

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A0P6RFM8_inward.pdb    Alignment file: A0A0P6RFM8_inw.pir

Procheck score ⇒ Ramachandran plot: 97.0% favored    3.0% allowed    .0% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A0P6RFM8_outward.pdb    Alignment file: A0A0P6RFM8_out.pir

Procheck score ⇒ Ramachandran plot: 93.3% favored    6.0% allowed    .7% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A0P6RFM8_occluded.pdb    Alignment file: A0A0P6RFM8_occ.pir

Procheck score ⇒ Ramachandran plot: 97.0% favored    3.0% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur