Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0N5CHC6

dbSWEET id: dbswt_1068

Accession:   A0A0N5CHC6

Uniprot status:   Unreviewed

Organism:   Strongyloides papillosus

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Panagrolaimoidea ⇒ Strongyloididae ⇒ Strongyloides.

Sequence Information back to top


Sequence length:   227

Substrate Binding Site:   MNWN           CVV:   479       CHI:   -6

Selectivity Filter:   FMGL           CVV:   431       CHI:   8.1

Fasta sequence:

>tr|A0A0N5CHC6|A0A0N5CHC6_STREA|Unreviewed|Strongyloides_papillosus|227
MNGIELFGLWLAVFSIGFTFLPIFQVLEWKKRGTSDGFSSISLVLPMLMMSCWFKHGVLT
NDKNNMLINGVNLVCFTFYVSIFAYYQSKRRNVALQVVSLLTTVYFIFNHVNNTHPDKAP
DVMGSIAAGTQIFGMVGGIYDLLRAMKLGTMEYIPAVIQFAMFVLISQWTLFGYLIGNQY
MFIANVAGLALNIITLGCYFIYPPLTWKVPIFGIEPQQKTKTDKKKQ

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   204

Alignment file: A0A0N5CHC6.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0N5CHC6_inward.pdb

Procheck score ⇒ Ramachandran plot: 89.9% favored    8.9% allowed    1.1% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0N5CHC6_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.3% favored    5.6% allowed    .6% week    .6% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0N5CHC6_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.1% favored    7.8% allowed    .6% week    .6% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur