Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0N5C3X5

dbSWEET id: dbswt_1275

Accession:   A0A0N5C3X5

Uniprot status:   Unreviewed

Organism:   Strongyloides papillosus

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Panagrolaimoidea ⇒ Strongyloididae ⇒ Strongyloides.

Sequence Information back to top


Sequence length:   702

Substrate Binding Site:   SQAN           CVV:   350       CHI:   -6

Selectivity Filter:   LGSM           CVV:   369       CHI:   4.5

Fasta sequence:

>tr|A0A0N5C3X5|A0A0N5C3X5_STREA|Unreviewed|Strongyloides_papillosus|702
MSESDYSYTSDDDNYYYGNNDFDLELDVVEEVNDEDFKDQSKAIDAETITKDDVVEIIES
IVESVKCRISGVFTTDQIRHLLFKTKFNDDEVVKKLKDNPENFLVDHKLLPIEEDVRKCK
RIKKSDAAFDSVSNNMECLICCSQFDLKEHKKLKSNCKHSFCKICWFNHIKSQVDMNNAA
NITCMATDCDIVCLPTLVSQITDDNNKASFELYNNYMKTLCNEYIEVHPKMIKCPGTDCL
SVIFAENASYKEVKCSKCSKKVCFSCSFQFHAPANCANMIKWKRKCEDDSETSNYIRAHT
KECPKCHTTIEKNGGCNHMTCKFCNNEFCYVCLGQWKEHGTSYYNCSKYNDDMRAKTEKN
ISKAASELKKYLHYFGRWDNHLKSLKLEEELREKIKERINEKINKNEGTWIDWQYLYEAA
EVLTKCRFTLMHCYPEAYYFTEDSPEKELFEYQLNMFEKAVEDLSCYTMESYENISYSLT
HLIELFTENILWSLFLTSTAIHAVLLISSPIQAVFKWFRRQSSDSDTCIPYIAGIIGSSL
WLRYAMFISDFKMVLLQSYAVLMQSFFIISLLIFRSKKKKLLRSVFVVYSTILFYNYYAS
IIPHDDGKILTGRLASTAQIAGSLVCPYLIYQAITTKVIDFVPMAPVAFTWVMEAHAIIY
SIGIDDFYMLLANTIFFCMDGSLLCMFFIFPTEKPPQKTVMN

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   485     Model end:   692

Alignment file: A0A0N5C3X5.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0N5C3X5_inward.pdb

Procheck score ⇒ Ramachandran plot: 88.0% favored    10.9% allowed    1.0% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0N5C3X5_outward.pdb

Procheck score ⇒ Ramachandran plot: 85.4% favored    14.6% allowed    .0% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0N5C3X5_occluded.pdb

Procheck score ⇒ Ramachandran plot: 87.0% favored    11.5% allowed    1.0% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0046872 - metal ion binding

GO:0004842 - ubiquitin-protein transferase activity

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF01485: IBR. PF03083: MtN3_slv. 

Interpro:   IPR031127: E3_UB_ligase_RBR. IPR002867: IBR_dom. IPR004316: SWEET_sugar_transpr. IPR013083: Znf_RING/FYVE/PHD. 

Panther:  PTHR11685

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur