Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0N4YW03

dbSWEET id: dbswt_1062

Accession:   A0A0N4YW03

Uniprot status:   Unreviewed

Organism:   Nippostrongylus brasiliensis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Strongylida ⇒ Trichostrongyloidea ⇒ Heligmonellidae ⇒ Nippostrongylinae ⇒ Nippostrongylus.

Sequence Information back to top


Sequence length:   271

Substrate Binding Site:   GNWN           CVV:   412       CHI:   -0.6

Selectivity Filter:   LGNV           CVV:   373       CHI:   4.1

Fasta sequence:

>tr|A0A0N4YW03|A0A0N4YW03_NIPBR|Unreviewed|Nippostrongylus_brasiliensis|271
MDLQLILQILSCCAIVTTIALFLCGIPICIEIMRRKTTKDISGVPFLMGLLGGSFWLRYG
FLKEDSTMIIVNVVAVSLFFIYCLFYMAFSNPRCMFATKFALVASLIGAMCAWVQYRPNI
DYLGLMCMTFNILNFGAPLAGLGVVLRKRCCDTLPLPMCVANLLVSSQWFLYGNIVRDAY
IMAPNGIGMALAVLQLSLFVIFPRKENGKSVVSHFADFFIGRRTEDVEKGESAGFIDGKR
TRKFSEGAMANADRKAARSLSVPDCSKFKSV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   204

Alignment file: A0A0N4YW03.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0N4YW03_inward.pdb

Procheck score ⇒ Ramachandran plot: 89.9% favored    7.8% allowed    2.2% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0N4YW03_outward.pdb

Procheck score ⇒ Ramachandran plot: 89.9% favored    7.3% allowed    2.2% week    .6% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0N4YW03_occluded.pdb

Procheck score ⇒ Ramachandran plot: 86.6% favored    10.1% allowed    2.8% week    .6% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur