Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0M9D1H1

dbSWEET id: dbswt_1421

Accession:   A0A0M9D1H1

Uniprot status:   Unreviewed

Organism:   Lactobacillus apinorum

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Bacilli ⇒ Lactobacillales ⇒ Lactobacillaceae ⇒ Lactobacillus.

Sequence Information back to top


Sequence length:   104

Substrate Binding Site:   ANAN           CVV:   326       CHI:   -3.4

Selectivity Filter:   ANAN           CVV:   326       CHI:   -3.4

Fasta sequence:

>tr|A0A0M9D1H1|A0A0M9D1H1_9LACO|Unreviewed|Lactobacillus apinorum| 104
MKIDNYVPKNQRREVSDQRIKNLKIMSKVAIFTSSLMYIAYIPEIIQNFSGTPVSPIQPF
VATINATLWTLYGWFKTYKDWPLIISNVPGVIFGLVTLVTVFVH

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   27     Model end:   103

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A0M9D1H1_inward.pdb    Alignment file: A0A0M9D1H1_inw.pir

Procheck score ⇒ Ramachandran plot: 92.2% favored    4.7% allowed    1.6% week    1.6% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A0M9D1H1_outward.pdb    Alignment file: A0A0M9D1H1_out.pir

Procheck score ⇒ Ramachandran plot: 92.2% favored    7.8% allowed    .0% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A0M9D1H1_occluded.pdb    Alignment file: A0A0M9D1H1_occ.pir

Procheck score ⇒ Ramachandran plot: 91.4% favored    8.6% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur