Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0K9P6Z0

dbSWEET id: dbswt_524

Accession:   A0A0K9P6Z0

Uniprot status:   Unreviewed

Organism:   Zostera marina

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Zosteraceae ⇒ Zostera.

Sequence Information back to top


Sequence length:   250

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   LNMA           CVV:   411       CHI:   4

Fasta sequence:

>tr|A0A0K9P6Z0|A0A0K9P6Z0_ZOSMR|Unreviewed|Zostera_marina|250
MGEANLRLAIGIMGNASSLLLFASPILTFKKVLQKKNIEGFSCIPYIMAMFNCLLYTWYG
LPVVSRGWENFPLITINGLGIFLELSFVSIYLRFASIKQKASEKVNGCLLVPALLLFVGV
ALTSTFSFHNHRTRKILVGSFGLVASVLMYSSPLVAVKQVIKTRSVKFMPFHLSLFTFIA
TSLWMAYGLVTHDLVLAAPNMVGCPMGLLQLLVYFIYRNKTPEFEQPPLKVVDLEKNGSD
ITPAAPIIPA

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   219

Alignment file: A0A0K9P6Z0.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0K9P6Z0_inward.pdb

Procheck score ⇒ Ramachandran plot: 84.9% favored    8.3% allowed    4.7% week    2.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0K9P6Z0_outward.pdb

Procheck score ⇒ Ramachandran plot: 88.0% favored    9.4% allowed    2.6% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0K9P6Z0_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.7% favored    6.8% allowed    1.6% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur