Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0K8RGC1

dbSWEET id: dbswt_1044

Accession:   A0A0K8RGC1

Uniprot status:   Unreviewed

Organism:   Ixodes ricinus

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Arthropoda ⇒ Chelicerata ⇒ Arachnida ⇒ Acari ⇒ Parasitiformes ⇒ Ixodida ⇒ Ixodoidea ⇒ Ixodidae ⇒ Ixodinae ⇒ Ixodes.

Sequence Information back to top


Sequence length:   210

Substrate Binding Site:   TNWN           CVV:   425       CHI:   -5.9

Selectivity Filter:   NTFV           CVV:   429       CHI:   2.8

Fasta sequence:

>tr|A0A0K8RGC1|A0A0K8RGC1_IXORI|Unreviewed|Ixodes_ricinus|210
METAKVVVGNLATVCTIINYASGIQICRNVYAKGNTNDVSPLPFLAGILTTFIWLQYGVK
KEDTILMWVNSIGLLLQLSFLICFHLHTKLKRPLHLKMFTLAAILAAIFCEVNYVVKNKD
TSLSILGFIGCAAALFFFSSPLATVAQVIRSQSTESLPFPLILSAFLVSSLWTLYGVLCD
DVFIYVPNFMGALITSCQLALFLIYPSASL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   207

Alignment file: A0A0K8RGC1.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0K8RGC1_inward.pdb

Procheck score ⇒ Ramachandran plot: 93.0% favored    6.4% allowed    .5% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0K8RGC1_outward.pdb

Procheck score ⇒ Ramachandran plot: 92.0% favored    6.4% allowed    1.6% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0K8RGC1_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.0% favored    5.9% allowed    1.1% week    1.1% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur