Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0K0FKA6

dbSWEET id: dbswt_1269

Accession:   A0A0K0FKA6

Uniprot status:   Unreviewed

Organism:   Strongyloides venezuelensis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Panagrolaimoidea ⇒ Strongyloididae ⇒ Strongyloides.

Sequence Information back to top


Sequence length:   738

Substrate Binding Site:   SQAN           CVV:   350       CHI:   -6

Selectivity Filter:   LGSM           CVV:   369       CHI:   4.5

Fasta sequence:

>tr|A0A0K0FKA6|A0A0K0FKA6_9BILA|Unreviewed|Strongyloides_venezuelensis|738
MSESDYSYTSDDDNYYYGNNDFDLELDVVEEVNDEDFKDQSKAIDAETITKDDVVEIIES
IVESVKCRISGLFTTDQIRHLLFKTKFNDEEVVKKLKDSPENFLVDHKLLPLEEDVRKCK
RIKKSDAAFDSVSNNMECLICCSQFDLKEHKKLKSNCKHSFCKICWFNHIKSQVDMNNAA
NITCMATDCDIVCLPTLVTQITDDNNKASFDLYNNYMKTLCNEYIEVHPKMIKCPGTDCL
SVIFAENASYKEVKCSKCSKKVCFSCSFQFHAPANCANMIKWKRKCEDDSETSNYIRAHT
KECPKCHTTIEKNGGCNHMTCKFCNNEFCYVCLGQWKEHGTSYYNCSKYNDDMRAKTEKN
ISKAASELKKYLHYFGRWDNHLKSLKLEEELREKIKERINEKINKNEGTWIDWQYLYEAA
EVLTKCRFTLMHCYPEAYYFTEDSPEKELFEYQLNMFEKAVEDLSWYVERSEQDNRSHLS
LCMAIAERNRKAVINEYYKKFNYTMESYENISYSLTHLIELFTENILWSLFLTSTAIHAV
LLISSPIQAVFKWFRRQSSDSDTCIPYIAGIIGSSLWLRYAMFISDFKMVLLQSYAVLMQ
SFFIISLLVFRSKKKKLLRSVFVVYSTILFYNYYASIIPYDDGKILTGRLASTAQIAGSL
VCPYLIYQAITTKVIDFVPMAPVAFTWVMEAHAIVYSIGIDDFYMLLANTIFFCMDGSLL
CMFFIFPTEKSPQKTVMN

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   521     Model end:   728

Alignment file: A0A0K0FKA6.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0K0FKA6_inward.pdb

Procheck score ⇒ Ramachandran plot: 80.2% favored    14.1% allowed    3.6% week    2.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0K0FKA6_outward.pdb

Procheck score ⇒ Ramachandran plot: 88.0% favored    10.4% allowed    .5% week    1.0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0K0FKA6_occluded.pdb

Procheck score ⇒ Ramachandran plot: 85.4% favored    12.0% allowed    2.1% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0046872 - metal ion binding

GO:0004842 - ubiquitin-protein transferase activity

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF01485: IBR. PF03083: MtN3_slv. 

Interpro:   IPR031127: E3_UB_ligase_RBR. IPR002867: IBR_dom. IPR004316: SWEET_sugar_transpr. IPR013083: Znf_RING/FYVE/PHD. 

Panther:  PTHR11685

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur