Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0K0DUP7

dbSWEET id: dbswt_1038

Accession:   A0A0K0DUP7

Uniprot status:   Unreviewed

Organism:   Strongyloides stercoralis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Panagrolaimoidea ⇒ Strongyloididae ⇒ Strongyloides.

Sequence Information back to top


Sequence length:   231

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   LSTG           CVV:   338       CHI:   1.9

Fasta sequence:

>tr|A0A0K0DUP7|A0A0K0DUP7_STRER|Unreviewed|Strongyloides_stercoralis|231
MVFLFNHDTILSVLSITAITTSISLFFAGAEICIRIKKKGNTDGIGSAPFLVTFLSCAFW
LQYGVLKDDHAVIMVNFIGCMMEGVYIWYYNIKTRNRRRFHKILFIECFIILSMLYYINH
DGEMEDKIENLGTICVIFNILTNSAPLVDLHTIIKNKSTESMPLPIILAALAGSIQWYFY
GFLLNDIYLQIPNGLSVIICLLQLALFWIYPSNNKKNTTDDEKKLISSEIC

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   4     Model end:   212

Alignment file: A0A0K0DUP7.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0K0DUP7_inward.pdb

Procheck score ⇒ Ramachandran plot: 87.8% favored    10.1% allowed    1.6% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0K0DUP7_outward.pdb

Procheck score ⇒ Ramachandran plot: 94.2% favored    5.3% allowed    .5% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0K0DUP7_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.5% favored    7.4% allowed    .5% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur