Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0J8CQG0

dbSWEET id: dbswt_485

Accession:   A0A0J8CQG0

Uniprot status:   Unreviewed

Organism:   Beta vulgaris

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ Caryophyllales ⇒ Chenopodiaceae ⇒ Betoideae ⇒ Beta.

Sequence Information back to top


Sequence length:   223

Substrate Binding Site:   TNWN           CVV:   355       CHI:   -7.9

Selectivity Filter:   LSMN           CVV:   417       CHI:   1.4

Fasta sequence:

>tr|A0A0J8CQG0|A0A0J8CQG0_BETVU|Unreviewed|Beta_vulgaris|223
MDKLSFIIGVIGNIISVLLFLSPLNTFIRIVRKKSTDGFESMPYVCTLLSTCLWTYYGII
RPGALLVATVNGFGALVELVYVALFITFAPPTMKAKTAKLAAILDVGFLGAVILISNLML
EGETRINMIGTIGAGLNIIMYGSPLVALKTVIKTRSVEYMPFLLSLFSFLNGGIWTVYAA
LVKDFFLLVPNAIGFILGTIQLVVYVCYMNPSKEQQYNEPLIY

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   210

Alignment file: A0A0J8CQG0.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0J8CQG0_inward.pdb

Procheck score ⇒ Ramachandran plot: 90.6% favored    7.7% allowed    .6% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0J8CQG0_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.9% favored    5.0% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0J8CQG0_occluded.pdb

Procheck score ⇒ Ramachandran plot: 90.6% favored    8.8% allowed    .6% week    .0% disallowed

Gene Informationback to top


Gene ID:   104890373     Total Exons:   6     Coding Exons:   6

The diagram below shows the position of Exon-junctions in the protein structure ( Loops and transmembrane helices ).

If more than 1 exon translates a single secondary-structure , only the final exon is represented in figure.
Point on the red bars to view exon number

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur