Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0G0LSC0

dbSWEET id: dbswt_1384

Accession:   A0A0G0LSC0

Uniprot status:   Unreviewed

Organism:   candidate division

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ candidate division CPR2.

Sequence Information back to top


Sequence length:   108

Substrate Binding Site:   ANAN           CVV:   326       CHI:   -3.4

Selectivity Filter:   TTTT           CVV:   372       CHI:   -2.8

Fasta sequence:

>tr|A0A0G0LSC0|A0A0G0LSC0_9BACT|Unreviewed|candidate division| 108
MSLASHLHSHPKNEENFNKLHSKKSVQIIDKLAMIVGVLAPLTALPQIYQLIITKDATGV
SILAWVLYIITASFWIIYGVAHKERAIIINNALWAILEFIIVLLALIY

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   31     Model end:   107

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A0G0LSC0_inward.pdb    Alignment file: A0A0G0LSC0_inw.pir

Procheck score ⇒ Ramachandran plot: 94.2% favored    4.3% allowed    1.4% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A0G0LSC0_outward.pdb    Alignment file: A0A0G0LSC0_out.pir

Procheck score ⇒ Ramachandran plot: 92.8% favored    5.1% allowed    2.2% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A0G0LSC0_occluded.pdb    Alignment file: A0A0G0LSC0_occ.pir

Procheck score ⇒ Ramachandran plot: 96.4% favored    2.2% allowed    1.4% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur