Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0F8CCH6

dbSWEET id: dbswt_2050

Accession:   A0A0F8CCH6

Uniprot status:   Unreviewed

Organism:   Methanosarcina

Kingdom:   Archaea

Taxonomy back to top


Archaea ⇒ Euryarchaeota ⇒ Methanomicrobia ⇒ Methanosarcinales;Methanosarcinaceae ⇒ Methanosarcina.

Sequence Information back to top


Sequence length:   103

Substrate Binding Site:   MNMN           CVV:   440       CHI:   -3.2

Selectivity Filter:   ACAC           CVV:   306       CHI:   8.6

Fasta sequence:

>tr|A0A0F8CCH6|A0A0F8CCH6_9EURY|Unreviewed|Methanosarcina|103
MIGYIAGALTTIAFAPSLIKALTTKSTTDISLLMLLCSTSCMVLWLFYGIQVDAPAIIAA
NSVSVILAASLRGLKLNYEYINLVDNFGKKIRGSKNKNAFLWK

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   77

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A0F8CCH6_inward.pdb    Alignment file: A0A0F8CCH6_inw.pir

Procheck score ⇒ Ramachandran plot: 94.1% favored    4.4% allowed    1.5% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A0F8CCH6_outward.pdb    Alignment file: A0A0F8CCH6_out.pir

Procheck score ⇒ Ramachandran plot: 94.1% favored    5.9% allowed    .0% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A0F8CCH6_occluded.pdb    Alignment file: A0A0F8CCH6_occ.pir

Procheck score ⇒ Ramachandran plot: 95.6% favored    4.4% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur