Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0E0KDJ6

dbSWEET id: dbswt_430

Accession:   A0A0E0KDJ6

Uniprot status:   Unreviewed

Organism:   Oryza punctata

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Oryzoideae ⇒ Oryzeae ⇒ Oryzinae ⇒ Oryza.

Sequence Information back to top


Sequence length:   375

Substrate Binding Site:   TNWN           CVV:   448       CHI:   -8.6

Selectivity Filter:   VSMN           CVV:   398       CHI:   1.8

Fasta sequence:

>tr|A0A0E0KDJ6|A0A0E0KDJ6_ORYPU|Unreviewed|Oryza_punctata|375
MADPSFFIGIVGNIISILVFASPIATFRRIVRSKSTEDFRWLPYVTTLLSTSLWTFYGLL
KPGGLLIVTVNGAGATLEAIYVMLYLAYAPKEIKAKMVKVVLAVNVGAMAAAVVVALVAL
HGGVRLFVVGVLCAALTIGMYAAPMAAMDKHLNVTVSSFRIVTFHRIYRSFAAGLMSLSG
CLKLRCHSNAIVLYMKCKASRTVVKTRSVEYMPFSLSFFLFLNGGVWSVYSLLVKDYFIG
IPNAIGFALGTAQLALYMAYRRTKKPAGKGGGDDDDDEEAQGVARLMGQVEMAPATAQRR
AQLHLHKGLSLPKPTAPRHGGLDRIIKSFSTTPVELHSVLHQHHHHHRFDSVADGDEEEA
AAFGHDAGNDSRSKR

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   262

Alignment file: A0A0E0KDJ6.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0E0KDJ6_inward.pdb

Procheck score ⇒ Ramachandran plot: 90.4% favored    8.3% allowed    .9% week    .4% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0E0KDJ6_outward.pdb

Procheck score ⇒ Ramachandran plot: 89.2% favored    7.8% allowed    3.0% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0E0KDJ6_occluded.pdb

Procheck score ⇒ Ramachandran plot: 86.2% favored    10.3% allowed    2.6% week    .9% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur