Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0D9ZVR2

dbSWEET id: dbswt_537

Accession:   A0A0D9ZVR2

Uniprot status:   Unreviewed

Organism:   Oryza glumipatula

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Oryzoideae ⇒ Oryzeae ⇒ Oryzinae ⇒ Oryza.

Sequence Information back to top


Sequence length:   260

Substrate Binding Site:   CSWN           CVV:   418       CHI:   -2.7

Selectivity Filter:   FSMT           CVV:   425       CHI:   3.2

Fasta sequence:

>tr|A0A0D9ZVR2|A0A0D9ZVR2_9ORYZ|Unreviewed|Oryza_glumipatula|260
MLLYSAPMYPTTCLYIISYTMFAQYIMHCLTLVFTMFPRLTFKRVIKKASVEEFSCIPYI
LALFSCLTYSWYGFPVVSYGWENLTVCSISSLGVLFEGTFISIYVWFAPRGKKKQVMLMA
SLILAVFCMTVFFSSFSIHNHHIRKVFVGSVGLVSSISMYGSPLVAMKQVIRTKSVEFMP
FYLSLFTLFTSLTWMAYGVIGRDPFIATPNCIGSIMGILQLVVYCIYSKCKEAPKVLHDI
EQANVVKIPTSHVDTKGHNP

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   13     Model end:   229

Alignment file: A0A0D9ZVR2.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0D9ZVR2_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.3% favored    4.6% allowed    .5% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0D9ZVR2_outward.pdb

Procheck score ⇒ Ramachandran plot: 92.3% favored    6.2% allowed    1.0% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0D9ZVR2_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.3% favored    6.2% allowed    .5% week    1.0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur