Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0D8YB09

dbSWEET id: dbswt_1265

Accession:   A0A0D8YB09

Uniprot status:   Unreviewed

Organism:   Dictyocaulus viviparus

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Strongylida ⇒ Trichostrongyloidea ⇒ Dictyocaulidae ⇒ Dictyocaulinae ⇒ Dictyocaulus.

Sequence Information back to top


Sequence length:   381

Substrate Binding Site:   GTWN           CVV:   400       CHI:   -5.5

Selectivity Filter:   LGDV           CVV:   368       CHI:   4.1

Fasta sequence:

>tr|A0A0D8YB09|A0A0D8YB09_DICVI|Unreviewed|Dictyocaulus_viviparus|381
MFEMFTHGFSFLNLLSLAAFFTTVGLFFCGIPICRQIWKRKDTTEISGAPFLMGVLGGCC
WMTYGYLKNDHTVLVVTGCQVILYSSYSIFYWFMSKDKLWITIKVSMVLALCATLIFSVR
LFGMKVFHPLGIICMTLNIGDFAAPLAGLRVVIRRGATSTLPLPLCIANFLVSTEWFFYG
LLVKDIYLITPNGIGAALAIGQLFLFVILPRKPGQRSLIARLCSCCSTNENEVDLEAPIK
EIIPETDTNEQQSEHFTRARRWSKKVIANVNTVAEEIEHVIGKASIHHQEQLVFTYRKEK
SSKFMYSQTIGDEDTASEKTVEGTIDGTVCKNGLNAFEKRDMILNPETLARKLAASQRFF
PESQTVNIRRTVSSPNLTDLS

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   211

Alignment file: A0A0D8YB09.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0D8YB09_inward.pdb

Procheck score ⇒ Ramachandran plot: 89.9% favored    6.7% allowed    3.4% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0D8YB09_outward.pdb

Procheck score ⇒ Ramachandran plot: 90.5% favored    8.9% allowed    .6% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0D8YB09_occluded.pdb

Procheck score ⇒ Ramachandran plot: 87.7% favored    10.1% allowed    1.7% week    .6% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur