Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0B2Q887

dbSWEET id: dbswt_409

Accession:   A0A0B2Q887

Uniprot status:   Unreviewed

Organism:   Glycine soja

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ rosids ⇒ fabids ⇒ Fabales ⇒ Fabaceae ⇒ Papilionoideae ⇒ Phaseoleae ⇒ Glycine ⇒ Soja.

Sequence Information back to top


Sequence length:   280

Substrate Binding Site:   SNWN           CVV:   428       CHI:   -8.7

Selectivity Filter:   GTVS           CVV:   319       CHI:   2.3

Fasta sequence:

>tr|A0A0B2Q887|A0A0B2Q887_GLYSO|Unreviewed|Glycine_soja|280
MAHANPMIFVVGILAPVPTFYRVCKKKTTEGFQSLPYVAALFTSMLWIFYAYIKTGEILL
ITINAFGCFIETVYLVIYIIYCPKKARFFTFKMIFLFNVGVIFLVVLLTHVLAKERTARI
ELLGWICVVLSTSVFAAPLSIIKVVIRTKSVEFMPITLSLLLTVSATMWMAYGILLRDIY
VTLPNFVGITFGTIQIVLYLIYRKSKPVKDQKLPEHKNHVVNDENASTAVSGENQGPNTT
GFVDIEIGEKKQVQEQAEKKQDQQFVNARDQTEHNKTRES

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   204

Alignment file: A0A0B2Q887.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0B2Q887_inward.pdb

Procheck score ⇒ Ramachandran plot: 95.1% favored    3.3% allowed    .5% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0B2Q887_outward.pdb

Procheck score ⇒ Ramachandran plot: 92.9% favored    4.9% allowed    .5% week    1.6% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0B2Q887_occluded.pdb

Procheck score ⇒ Ramachandran plot: 89.7% favored    7.1% allowed    2.2% week    1.1% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR018179: SWEET10-like. IPR004316: SWEET_sugar_transpr. 

Panther:  PTHR10791:SF22

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur