Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A0B0PRA3

dbSWEET id: dbswt_796

Accession:   A0A0B0PRA3

Uniprot status:   Unreviewed

Organism:   Gossypium arboreum

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ rosids ⇒ malvids ⇒ Malvales ⇒ Malvaceae ⇒ Malvoideae ⇒ Gossypium.

Sequence Information back to top


Sequence length:   255

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   LNMN           CVV:   440       CHI:   -1.3

Fasta sequence:

>tr|A0A0B0PRA3|A0A0B0PRA3_GOSAR|Unreviewed|Gossypium_arboreum|255
MVSHLVTTIRNVVGITGNVISLFLFLSPVPTFIRIWKKGSVEQFSPAPYLATLINCMVWV
VYGLPMVHPNSTLVVTINGTGTAIEIVYLTLFLIYCHDKKKRVKVMLIVLVEIIFIAGVT
ALVLIIAHTTQRRSMVVGIIAILFNIMMYAAPLSVMKLVITTKSVEYMPFFLSLASFANG
VAWTAYAFLPFDPFIAVPNGLGTLFSLAQLLLYATYYKSTKRIIAARQEAKMEMHLSEVV
VNGDNKDPKKNSTAP

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   3     Model end:   218

Alignment file: A0A0B0PRA3.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A0B0PRA3_inward.pdb

Procheck score ⇒ Ramachandran plot: 92.7% favored    5.2% allowed    1.6% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A0B0PRA3_outward.pdb

Procheck score ⇒ Ramachandran plot: 92.1% favored    6.8% allowed    .5% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A0B0PRA3_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.7% favored    5.8% allowed    1.6% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur