Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A090LT69

dbSWEET id: dbswt_1263

Accession:   A0A090LT69

Uniprot status:   Unreviewed

Organism:   Strongyloides ratti

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Panagrolaimoidea ⇒ Strongyloididae ⇒ Strongyloides.

Sequence Information back to top


Sequence length:   363

Substrate Binding Site:   GTWN           CVV:   400       CHI:   -5.5

Selectivity Filter:   LGDV           CVV:   368       CHI:   4.1

Fasta sequence:

>tr|A0A090LT69|A0A090LT69_STRRB|Unreviewed|Strongyloides_ratti|363
MFEIFYEVSLLNFLSLLAFVTTVALFFCGTAICRQIWRRKDTKEISGAPFLMGILGGTCW
LTYGYLKPDSTVIYVTSVQCILYISYSTFYWIMTKDKLWITFQLGGIYTICASLILSVYF
FGHKVYHPLGIICVTLNAMDFGAPLAGIHVVLRKRATSTLPLPLCIANFAVSTEWFLYGL
LKEDLYIIVPNGIGSFLSTLQIIIFLVLPRKHGREIPIVWLFKKLTCRTSVKPDIECEPQ
IVNYHDEEDVKEEIPDRSIKGRLNSFRQSIPKLIRKPSEMIAHIGSDIANYQHRDPFDYH
PEIDESDDSDSESINDAANRFSQSMFAQIQKDRGVSFKTRDRGHLRKRQLSLPNIYEAIE
KEK

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   4     Model end:   210

Alignment file: A0A090LT69.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A090LT69_inward.pdb

Procheck score ⇒ Ramachandran plot: 90.7% favored    6.6% allowed    1.1% week    1.6% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A090LT69_outward.pdb

Procheck score ⇒ Ramachandran plot: 96.2% favored    3.8% allowed    .0% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A090LT69_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.8% favored    7.1% allowed    1.1% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur