Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A090KWH3

dbSWEET id: dbswt_1261

Accession:   A0A090KWH3

Uniprot status:   Unreviewed

Organism:   Strongyloides ratti

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Panagrolaimoidea ⇒ Strongyloididae ⇒ Strongyloides.

Sequence Information back to top


Sequence length:   425

Substrate Binding Site:   MNWN           CVV:   479       CHI:   -6

Selectivity Filter:   FMGL           CVV:   431       CHI:   8.1

Fasta sequence:

>tr|A0A090KWH3|A0A090KWH3_STRRB|Unreviewed|Strongyloides_ratti|425
MNSIELFGLWLAVFSIGFTFLPIFQVLEWKKRGSSDGFSSINLVLPMLMMSCWFKHGILT
NDKNNMMINGINLICFTIYVSIFAYYQSRRRNVLMQVISLITTIYFIFNHVDNIHPDKAP
DVMGSIAAGTQIFGMIGGIYDLLRAIKLGTMEYIPAVIQFAIFPLTTQWTLFGYLINNQY
MFVANMAGLLLNIVTIASYFVYPPLTWKVPIFGIEPQQKIKKKITSNNIDTNYPIDCPEG
TFLYCQHAFNKAMGIEIDLTWKNISQIQFTVDSFMFQIVDNYIYSCQKRREFYNCLGEKY
TTCINRYHLLSKIDDPTLILPAYLYSAFWKGFDFSCNGGLTTSIYNPETFNQTLLHNEIT
QCQKLFLNDMQKSITNICLNTLSYMNCMQNIYTQKTSLQMGWFACEKARIQFADDCPDLR
CLLIQ

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   204

Alignment file: A0A090KWH3.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A090KWH3_inward.pdb

Procheck score ⇒ Ramachandran plot: 85.6% favored    12.2% allowed    .6% week    1.7% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A090KWH3_outward.pdb

Procheck score ⇒ Ramachandran plot: 89.5% favored    9.4% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A090KWH3_occluded.pdb

Procheck score ⇒ Ramachandran plot: 89.0% favored    9.4% allowed    1.7% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur