Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A085KAS2

dbSWEET id: dbswt_1315

Accession:   A0A085KAS2

Uniprot status:   Unreviewed

Organism:   Sphingobium yanoikuyae

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Alphaproteobacteria ⇒ Sphingomonadales ⇒ Sphingomonadaceae ⇒ Sphingobium.

Sequence Information back to top


Sequence length:   89

Substrate Binding Site:   TNTN           CVV:   378       CHI:   -8.4

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|A0A085KAS2|A0A085KAS2_SPHYA|Unreviewed|Sphingobium yanoikuyae|89
MARHLDERTLRVVGWIATVTAILMYGSYLDQIRMNLAGEKGSVIQPLATVLNTCLWAAYG
WLHKDKDWPIIVANVPGIILGATCLYTAL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   14     Model end:   90

Inward Open:

Template:   4X5M.pdb

Model structure:  A0A085KAS2_inward.pdb    Alignment file: A0A085KAS2_inw.pir

Procheck score ⇒ Ramachandran plot: 87.7% favored    8.5% allowed    2.3% week    1.5% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A0A085KAS2_outward.pdb    Alignment file: A0A085KAS2_out.pir

Procheck score ⇒ Ramachandran plot: 92.3% favored    5.4% allowed    1.5% week    .8% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A0A085KAS2_occluded.pdb    Alignment file: A0A085KAS2_occ.pir

Procheck score ⇒ Ramachandran plot: 90.0% favored    7.7% allowed    2.3% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur