Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A0A061E446

dbSWEET id: dbswt_105

Accession:   A0A061E446

Uniprot status:   Unreviewed

Organism:   Theobroma cacao

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ rosids ⇒ malvids ⇒ Malvales ⇒ Malvaceae ⇒ Byttnerioideae ⇒ Theobroma.

Sequence Information back to top


Sequence length:   287

Substrate Binding Site:   SNWN           CVV:   428       CHI:   -8.7

Selectivity Filter:   VSVS           CVV:   356       CHI:   6.8

Fasta sequence:

>tr|A0A061E446|A0A061E446_THECC|Unreviewed|Theobroma_cacao|287
MAVMGDHHSWAVAFGVFGNIISVLVYLAPVPTFYRIYRKKSTESFQSLPYQVALFSSMLW
LYYALIKKDAFLLITINSFGCIVETMYISIYIAYASKNSRMSAMKLFVGMNVGLFSLILI
LTRFLVKSSIRIQLLGWICVAISVSVFAAPLNIVARVIRTGSVEFMPFNLSFFLTLSAIM
WFAYGLFIKDICVALPNVLGFVLGMLQMLLYAVYRNTKKAIEEKKPPEQLKTVVVLSTIG
ASEVYPVDIQPDANSNKTKENEQTGEPDKTEKSLEDSSDLQSNECPV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   4     Model end:   216

Alignment file: A0A061E446.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  A0A061E446_inward.pdb

Procheck score ⇒ Ramachandran plot: 95.3% favored    3.6% allowed    .5% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  A0A061E446_outward.pdb

Procheck score ⇒ Ramachandran plot: 95.9% favored    3.6% allowed    .0% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  A0A061E446_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.7% favored    7.3% allowed    .5% week    .5% disallowed

Gene Informationback to top


Gene ID:   18608900     Total Exons:   6     Coding Exons:   6

The diagram below shows the position of Exon-junctions in the protein structure ( Loops and transmembrane helices ).

If more than 1 exon translates a single secondary-structure , only the final exon is represented in figure.
Point on the red bars to view exon number

Gene Ontologyback to top


GO:0005887 - integral component of plasma membrane

GO:0008515 - sucrose transmembrane transporter activity

GO:0071470 - cellular response to osmotic stress

GO:0010150 - leaf senescence

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur