MIPModDB
 
STRUCTURE BASED ALIGNMENT
  A conserved positions at helix-helix interface     A Ar/R selectivity filter

Protein
Helix 1
Helix 2
1J4N
FWRAVVAEFLAMILFIFISIGSALGF
DNVKVSLAFGLSIATLAQSVGH
1FX8
LKGQCIAEFLGTGLLIFFGVGCVAAL
GQWEISVIWGLGVAMAIYLTAG
1RC2
MFRKLAAECFGTFWLVFGGCGSAVLA
GFAGVALAFGLTVLTMAFAVGH
1Z98
FWRAAIAEFIATLLFLYITVATVIGH
GLLGIAWAFGGMIFVLVYCTAG
2B60
FWRAIFAEFFATLFYVFFGLGASLRW
HVLQVALAFGLALATLVQAVGH
2F2B
LTKRCIAEFIGTFILVFFGAGSAAVT
DWVAIGLAFGFAIAASIYALGN
SACERE0479HFIAAVGEFCGTFMFLWCAYVICNVAQLIMIAIGFGFSVMFSIWCFAG
SACERE0480HMREPFAEFLGTLVLVIFGVGGNLQASYESLSFAWGFGCMLGVYVAGG
SACERE0481YLKEFLAEFMGTMVMIIFGSAVVCQVTFDDVALGWAAAVVMGYFCAGG
SACERE0621HFIAAVGEFCGTFMFLWCAYVICNVAQLIMIAIGFGFSVMFSIWCFAG
SACERE0628HFIAAVGEFCGTFMFLWCAYVICNVAQLIMIALGFGFSVMFSIWCFAG
SACERE0879HFIAAVGEFCGTFMFLWCAYVICNVAQLIMIAIGFGFSVMFSIWCFAG
SACERE1009HFIAAVGEFCGTFMFLWCAYVICNVA QLIMIALGFGFSVMFSIWCFAG

Protein
Helix 3
Helix 4
1J4N
SVLRAIMYIIAQCVGAIVATAILSG
SGQGLGIEIIGTLQLVLCVLATT
1FX8
DKRKVIPFIVSQVAGAFCAAALVYG
FVQAFAVEMVITAILMGLILALT
1RC2
PAKEVVGYVIAQVVGGIVAAALLYL
MLSALVVELVLSAGFLLVIHGAT
1Z98
SLLRALVYMIAQCLGAICGVGLVKA
KGTALGAEIIGTFVLVYTVFSAT
2B60
SLLRAICYVVAQLLGAVAGAAVLYS
VGQATIVEIFLTLQFVLCIFATY
2F2B
PGREVVPYIIAQLLGAAFGSFIFLQ
YWQAMLAEVVGTFLLMITIMGIA
SACERE0479SPTRCVVMWVSQIVAGMAAGGAASARTRGLFLEMFGTAILCLTVLMTA
SACERE0480PWKKVPVYIVAQIIGAYFGGAMAYGWRNAFFDEFIGASILVGCLMALL
SACERE0481PLKKVPYYFAGQLIGAFTGALILFISGRQFFSEFLCGAMLQAGTFALT
SACERE0621SPTRCVVMWVSQIVAGMAAGGAASARTRGLFLEMFGTAILCLTVLMTA
SACERE0628~PARCVVMWFPQIIAGMAAGGAASARSRGLFLEMFGTAVLCLTVLMTA
SACERE0879SPTRCVVMWVSQIVAGMAAGGAASARTRGLFLEMFGTAILCLTVLMTA
SACERE1009SPARCVVMWFSQIIAGMAAGGAASARSRGLFLEMFGTAVLCLTVLMTA

Protein
Helix 5
Helix 6
1J4N
SGPLAIGFSVALGHLLAID
WIFWVGPFIGAALAVLIYDFI
1FX8
LAPLLIGLLIAVIGASMGP
LVPLFGPIVGAIVGAFAYRKL
1RC2
FAPIAIGLALTLIHLISIP
WFFWVVPIVGGIIGGLIYRTL
1Z98
LAPLPIGFAVFMVHLATIP
WIFWVGPFIGAAVAAAYHQYV
2B60
SVALAVGFSLTLGHLFGMY
WVYWVGPVIGAGLGSLLYDFL
2F2B
FAGIIIGLTVAGIITTLGN
SIYVIGPIVGAVLAALTYQYL
SACERE0479MAALPIGISLFIAHVALTAWIYWIGTLLGSILAWSVWQLL
SACERE0480MTALIIGFLVAAIGMALGYWGAWGGPIAGGIAGALIYDIF
SACERE0481VFPLMMFILIFIINASMAYWVPMVGPFIGALMGGLVYDVC
SACERE0621MAALPIGISLFIAHVALTAWIYWIGPLLGSILAWSVWQLL
SACERE0628MAALPIGISLFMAHMALTGWIYWIGPLLGAFLAWSVWQLL
SACERE0879MAALPIGISLFIAHVALTAWIYWIGTLLGSILAWSVWQLL
SACERE1009MAALPIGISLFMAHMALTGWIYWIGPLLGAFLAWSVWQLL

Protein
Loop B
Loop E
1J4N
AHLNPAVTLGLLLS
GCGINPARSFGSSVIT
1FX8
AHLNPAVTIALWLF
GFAMNPARDFGPKVFA
1RC2
GHFNPAVTIGLWAG
NTSVNPARSTAVAI-F
1Z98
GHINPAVTFGLFLA
GTGINPARSFGAAVIF
2B60
AHVNPAVTFAFLVG
GAGMNPARSFAPAILT
2F2B
CHINPAVTIGLWSV
GSSLNPARTFGPYLND
SACERE0479GALNPAMSLSLCLAGTGVNPARSLGAAVAA
SACERE0480GHINPAVTISMAIFSFTINPARDLGPRIFA
SACERE0481AHLNPSITLANLVYGTAMNLARDLGPRLAL
SACERE0621GALNPAVSLSLCLAGTGVNPARSLGAAVAA
SACERE0628GALNPAVSLSLCLAGTGVNPARSLGAAVAA
SACERE0879GALNPAMSLSLCLAGTGVNPARSLGAAVAA
SACERE1009GALNPAVSLSLCLAGTGVNPARSLGAAVAA
 
 
Last Updated: Thursday, January 2, 2025
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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