MIPModDB@IITKanpur



	MIPModDB

ACCESSION NUMBER

ORGANISM

: Vitis berlandieri x Vitis rupestris

ANNOTATION

: Putative aquaporin PIP1-1

UNIPROT ACCESSION

: Q9M7B4

GENE STRUCTURE

Gene structure for this protein is not available

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by GCG's GAP program)
	from	to	1J4N	1FX8	2F2B
286	42	286	54.6	40.3	45.7

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
FHTR	NPA	NPA	1.3	2	1.6

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Diameter profile along the channel

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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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