MIPModDB@IITKanpur



	MIPModDB

ACCESSION NUMBER

ORGANISM

: Pseudomonas putida (strain KT2440)

ANNOTATION

: Glycerol uptake facilitator protein GlpF

UNIPROT ACCESSION

: Q88NX7

GENE STRUCTURE

Gene structure for this protein is not available

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by GCG's GAP program)
	from	to	1J4N	1FX8	2F2B
283	1	274	42.1	80.4	48.3

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
WGFR	NPA	NPA	2	1.3	1.7

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Diameter profile along the channel

Last Updated:
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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