MIPModDB@IITKanpur



	MIPModDB

ACCESSION NUMBER

: AAK98737

ORGANISM

: Oryza sativa subsp. japonica

ANNOTATION

: Tonoplast Intrinsic Protein : OsTIP1-1

UNIPROT ACCESSION

: TIP1_ORYSA

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by GCG's GAP program)
	from	to	1J4N	1FX8	2F2B
250	13	245	51.4	41.5	48.7

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
HIAV	NPA	NPA	1.8	2	1.8

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Diameter profile along the channel

Last Updated:
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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