MIPModDB@IITKanpur



	MIPModDB

ACCESSION NUMBER

: EFC36645.1

ORGANISM

: Naegleria gruberi

ANNOTATION

: Predicted protein

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by GCG's GAP program)
	from	to	1J4N	1FX8	2F2B
285	14	247	48.7	41.8	43.8

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
HLAR	NCA	NPA	1.6	1.8	1.5

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Diameter profile along the channel

Last Updated:
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur