MIPModDB@IITKanpur



	MIPModDB

ACCESSION NUMBER

: NP_505691.1

ORGANISM

: Caenorhabditis elegans

ANNOTATION

: AQuaPorin or aquaglyceroporin related family member (aqp-5)

UNIPROT ACCESSION

: Q18469

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by GCG's GAP program)
	from	to	1J4N	1FX8	2F2B
290	7	290	36.8	39.4	39.5

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
HITR	NPV	NPV	1.9	1.6	1.7

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Diameter profile along the channel

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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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