MIPModDB@IITKanpur



	MIPModDB

ACCESSION NUMBER

: YP_833895

ORGANISM

: Burkholderia cenocepacia HI2424

ANNOTATION

: MIP family channel proteins

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by GCG's GAP program)
	from	to	1J4N	1FX8	2F2B
247	1	231	44.4	45.7	53.8

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
FHTR	NPA	NPA	1.6	1.6	1.7

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Diameter profile along the channel

Last Updated:
Best Viewed at 1024X768 resolution on IE 5.0+, Firefox 1.0+

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur