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    ACCESSION NUMBER : YP_001237069
    ORGANISM : Bradyrhizobium sp. BTAi1
    ANNOTATION : Aquaporin Z Water Channel (MIP family)

GENE STRUCTURE


    Exons      Introns   Helix start position   Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence Length modeled Similarity with templates
(as calculated by GCG's GAP program)
  from to 1J4N 1FX8 2F2B
247 1 231 47.1 43.8 53.8

STRUCTURE BASED INFORMATION

Residues in selectivity filter NPA motif Root mean squared deviation with templates
(as calculated by DALI program)
  I II 1J4N 1FX8 2F2B
FHTR NPA NPA 1.5 1.9 1.4

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N
Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Diameter profile along the channel
 
 
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur