MIPModDB@IITKanpur



	MIPModDB

ACCESSION NUMBER

: ZP_00134653

ORGANISM

: Actinobacillus pleuropneumoniae serovar 1 str. 4074

ANNOTATION

: COG0580: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by GCG's GAP program)
	from	to	1J4N	1FX8	2F2B
228	1	226	47.3	49	54.2

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
FHTR	NPA	NPA	1.5	1.7	1.4

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Diameter profile along the channel

Last Updated:
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur