MIPModDB
 
STRUCTURE BASED ALIGNMENT
  A conserved positions at helix-helix interface     A Ar/R selectivity filter

Protein
Helix 1
Helix 2
1J4N
FWRAVVAEFLAMILFIFISIGSALGF
DNVKVSLAFGLSIATLAQSVGH
1FX8
LKGQCIAEFLGTGLLIFFGVGCVAAL
GQWEISVIWGLGVAMAIYLTAG
1RC2
MFRKLAAECFGTFWLVFGGCGSAVLA
GFAGVALAFGLTVLTMAFAVGH
1Z98
FWRAAIAEFIATLLFLYITVATVIGH
GLLGIAWAFGGMIFVLVYCTAG
2B60
FWRAIFAEFFATLFYVFFGLGASLRW
HVLQVALAFGLALATLVQAVGH
2F2B
LTKRCIAEFIGTFILVFFGAGSAAVT
DWVAIGLAFGFAIAASIYALGN
BRDIST1218ALKAAVAEFISTLIFVFAGQGSGMAFGLISAAIAHAFALFVAVSVGAN
BRDIST1219ALKAAVAEFISTLIFVFAGQGSGMAFGLISAAIAHAFALFVAVSVGAN
BRDIST1220ALKAAVAEFISTLIFVFAGQGSGMAFGLISAAIAHAFALFVAVSVGAN
BRDIST1221ALKAAVAEFISTLIFVFAGQGSGMAFGLISAAIAHAFALFVAVSVGAN
BRDIST1222ALKAAVAEFISTLIFVFAGQGSGMAFGLISAAIAHAFALFVAVSVGAN
BRDIST1223LYRAAIAEFTATLLFVYIAIATVIGHGILGIAWSFGGTIFVLVYSTAG
BRDIST1224FLQMLLAEFFSTYFLLFAGMGAIVVNTFPGITMVWGLAVMVMIYTVGH
BRDIST1225LYRAVIAEFIATLLFLYITVATVIGYGILGIAWAFGGMIFVLVYCTAG
BRDIST1226LYRAVIAEFVATLLFLYITVATVIGYGILGIAWAFGGMIFVLVYCTAG
BRDIST1227LLKKVISEVVATFLLVFVTCGAASIYSQLGQSLVGGLIVTVMIYATGH
BRDIST1228TFKAAVAEFISMLIFVFAGSGSGMAFGLIAAALAHAFALFVAVSVGAN
BRDIST1229LIKELVMEGVATFVVIFWSCTAALLQHSLSFPMVCLVVALTVALVLGW
BRDIST1230CLRAVLGELVLTFLFVFVGVGSTITAALIAVALAHALVVAVFATAGFH
BRDIST1231CARAVLAEAVLTFLFVFSGVASAMAAGLTAVASAHAMAVAVMVSAGLH
BRDIST1232CVRAVLGELVLTFLFVFTGVAAVMAATLAGVALAQALAAGVLVTAGFH
BRDIST1233FVQKILAEIFGTYFLIFAGCAAVAVNTFPGICITWGLAVMVMVYSVGH
BRDIST1234SIKSYVAEFIATLLFVFAGVGSAIAYGLVAVAIAHAFALFVGVAIAAN
BRDIST1236FYRAGIAEFIATFLFLYISVLTVMGVGIQGIAWSFGGMIFVLVYCTAG
BRDIST1237LLKKMVSEVVSTFLLVFVTCGASAINSQLGQSVAGGLIVTVMIYSVGH
BRDIST1238--LLILAEFLGTFILMFTQVSAIIMDGLMGIAVSVGLAVTVLVFSTIH
BRDIST1239LVKKVMAEFLGTFMLIFILLSAVVTNGLLGVAATAGLAIVVIVSALFH
BRDIST1240LYRAVIAEFTATLLFVYVTVATVIGHGLLGIAWAFGGSIAVLVYCTAG
BRDIST1241FVQKIIAEIFGTYFLIFAGCGAVTINTFPGVAIVWGLAVMVMIYAVGH
BRDIST1242TIRAAISEFLATAIFVFAAEGSILSLGLVAVALAHALALAVAVSVAVN
BRDIST1243LTRKLGAEFVGTFILIFFATAAPIVNSPFGNAACAGLAVTTIILSTGH
BRDIST1244LYRAAIAEFVATLLFLYITVATVIGYGILGIAWAFGGMIFVLVYCTAG
BRDIST1245LYRAVIAEFMATLIFLYISIATVIGYGYLGVAWSFGATIFVLVHCTGG
BRDIST1246MAASAVKAAAADGVVTFLWVLCVSTLALLVTVSLLSLLLFAFNLLCDA
BRDIST1247LYRAAIAEFTATFIFLYVSIATVIGYGYLGVAWSFGATIFVLVYCTGG
BRDIST1248LLKKVMAEFLGTFILMFTQVSSIMIMGLMGIAVSVGLAVTVLVISLVH
BRDIST1249LYRAAIAEFVATLLFLYITVATVIGYGILGIAWAFGGMIFVLVYCTAG
BRDIST1250LYRAAIAEFVATLLFLYITVATVIGYGILGIAWAFGGMIFVLVYCTAG
BRDIST1251TSRAVLSELVATAVFVFAAEGSLYGLGLLVVAVAHALALAAAVALSIN
BRDIST1252SIRSYVAEFIATLLFVFAGVGSAIAYGLVAIAIAHAFALFVGVAMAAN
BRDIST1253FYRAGIAEFMATFLFLYVTILTVMGVGIQGIAWSFGGMIFALVYCTAG
BRDIST1254SLRSYLAEFVSTFLFVFVAVGSAMSASLVATAVAQSFGLFAAVFIAAD

Protein
Helix 3
Helix 4
1J4N
SVLRAIMYIIAQCVGAIVATAILSG
SGQGLGIEIIGTLQLVLCVLATT
1FX8
DKRKVIPFIVSQVAGAFCAAALVYG
FVQAFAVEMVITAILMGLILALT
1RC2
PAKEVVGYVIAQVVGGIVAAALLYL
MLSALVVELVLSAGFLLVIHGAT
1Z98
SLLRALVYMIAQCLGAICGVGLVKA
KGTALGAEIIGTFVLVYTVFSAT
2B60
SLLRAICYVVAQLLGAVAGAAVLYS
VGQATIVEIFLTLQFVLCIFATY
2F2B
PGREVVPYIIAQLLGAAFGSFIFLQ
YWQAMLAEVVGTFLLMITIMGIA
BRDIST1218TLFRGLLYWVAQLLGSTAACFLLRFVWEALVLEIVMTFGLVYTVYATA
BRDIST1219TLFRGLLYWVAQLLGSTAACFLLRFVWEALVLEIVMTFGLVYTVYATA
BRDIST1220TLFRGLLYWVAQLLGSTAACFLLRFVWEALVLEIVMTFGLVYTVYATA
BRDIST1221TLFRGLLYWVAQLLGSTAACFLLRFVWEALVLEIVMTFGLVYTVYATA
BRDIST1222TLFRGLLYWVAQLLGSTAACFLLRFVWEALVLEIVMTFGLVYTVYATA
BRDIST1223TLLRAVFYIVSQCVGAIFGAAIARSAAAGLGAEVVGTFVLVYIVFSAT
BRDIST1224PWKRVPAYMLVQVFAAIIVSVVLRLNIQSLVTEFTTTFYLVFVVMAVA
BRDIST1225SLVRALLYMIAQCLGAMCGVGLVKAKGTGLAAEIIGTFVLVYTVFSAT
BRDIST1226SLVRALLYMVAQCLGAICGVGLVKGMGTGLAAEIIGTFVLVYTVFSAT
BRDIST1227PWIQVPFYWAAQFTGAMCAAFVLRA--HALVIEIVVTFNMMFVTCAVA
BRDIST1228SLLKAIVYWVAQLLGSTAACLLLQI--NAVVFEIVMTFGLVYTVYATA
BRDIST1229PWRKLPLYVMVQLAASVLACLAVNA--LPFVFEFLGSAVLMIVIATAA
BRDIST1230TLLRSSFFVVAQMLGSSCACLLLRAPIQGVVAEVVFTFTLLFTIYAAI
BRDIST1231TLFRSALYVPAQLLGSSLACLLLSFAAQGLLWEATLTFSLLFAVYATV
BRDIST1232SAFRAVLYVAAQLLASSLACILLRYPMQGLVMEIIFTFSLLFVVYATI
BRDIST1233PWKQVPAYAAAQLIGSTAAGLTLRL--QSLVLEFIITFYLMFVVSGVA
BRDIST1234TILTGIFYWVAQLLGATVACFLLKFELEGVVMEIVITFALVYTVYATA
BRDIST1236SLTRAVFYMVMQCLGAICGAGVVKGKGDGLGAEIVGTFVLVYTVFSAT
BRDIST1237PWIQVPFYWASQFTGAICASFVLKA--HSLLIEIIVTFNMMFVTLAVA
BRDIST1238PPAHLVPYIAAQVLGSTAASFVGNA--EAFAIKFITTFVLLFVITAVA
BRDIST1239PRAHLAPYMAAQLLGSVTASLAAKGNMEAFFIEFITTFILLFVIIAVA
BRDIST1240SLPRAGLYMLAQCLGAICGAGLVRTNAAGFVAEVVGTFVLVYTVFSAT
BRDIST1241PWRQVPAYVLAQMLGATLASGTLRLEVQSLVLEFIITFYLMFVISGVA
BRDIST1242TLVRALFYWVAQLLGAIVASLLLRLDWHAVLLEAVMTFGLMYAYYATV
BRDIST1243PWLQVPAYVAVQSLASVCAGFALKGTAQAFFTEFIITFNLLFVVTAVA
BRDIST1244SLVRAVLYIVAQCLGAICGVGLVKGKGTGLAAEIIGTFVLVYTVFSAT
BRDIST1245SLVRASMYIAAQCLGAICGAAIVKAVGGAIGAEIVGTFVLVYTVFSST
BRDIST1246SLFSVALRLPAQAAGAVGGALAISE---GAVAEGLLTFVITLAVLWII
BRDIST1247SLVRAVLYIVAQCLGAICGAGLVKGVGAAFGAEIAGTFVLVYTVLSAT
BRDIST1248PPAHLVPYMAAQVLGSTAASFFVCKAAEAFFVEFIVTFILLFVITAVA
BRDIST1249SLVRAVLYMVAQCLGAICGVGLVKGKGTGLAAEIIGTFVLVYTVFSAT
BRDIST1250SLVRAVLYMVAQCLGAICGVGLVKGKGTGLAAEIIGTFVLVYTVFSAT
BRDIST1251SFARAVLYWVAQLLGSVLAALLLSLERHALLLEVVMTFGLMYTVYATA
BRDIST1252TILTGIFYWVAQLLGASVACLLLQF--EGVVMEIVITFALVYTVYATA
BRDIST1253SLTRAVFYIVMQCLGAICGAGVVKGKGDGLGAEIVGTFVLVYTVFSAT
BRDIST1254AVPSAIFYWSCQLLGSTFACLVLHYGFGAAIVEGVMTFMLVYAVHVAA

Protein
Helix 5
Helix 6
1J4N
SGPLAIGFSVALGHLLAID
WIFWVGPFIGAALAVLIYDFI
1FX8
LAPLLIGLLIAVIGASMGP
LVPLFGPIVGAIVGAFAYRKL
1RC2
FAPIAIGLALTLIHLISIP
WFFWVVPIVGGIIGGLIYRTL
1Z98
LAPLPIGFAVFMVHLATIP
WIFWVGPFIGAAVAAAYHQYV
2B60
SVALAVGFSLTLGHLFGMY
WVYWVGPVIGAGLGSLLYDFL
2F2B
FAGIIIGLTVAGIITTLGN
SIYVIGPIVGAVLAALTYQYL
BRDIST1218IAPLAIGFIVGANILVGGAWVYWVGPLIGGGLAGVIYEVL
BRDIST1219IAPLAIGFIVGANILVGGAWVYWVGPLIGGGLAGVIYEVL
BRDIST1220IAPLAIGFIVGANILVGGAWVYWVGPLIGGGLAGVIYEVL
BRDIST1221IAPLAIGFIVGANILVGGAWVYWVGPLIGGGLAGVIYEVL
BRDIST1222IAPLAIGFIVGANILVGGAWVYWVGPLIGGGLAGVIYEVL
BRDIST1223LAPLPIGFAVFMVHLATIPWIFWVGPLLGAALAMVYHEFV
BRDIST1224MAGVAVGATITLNALFSGPWVYILGPFAGGAAGAWAYNLM
BRDIST1225LAPLPIGFAVFMVHLATIPWIFWVGPMVGAAIAAFYHQYI
BRDIST1226LAPLPIGFAVFMVHLATIPWIFWVGPFIGAAIAALYHQTV
BRDIST1227LAGLAVGAAVCITSIFAGPWIYFLGPVIGTLSGAWVYTYI
BRDIST1228IAPIAIGFIVGANILAGGAWVYWLGPFAGAAIAALVYDIV
BRDIST1229VGGVAIGAAVGTLGLVIGPWIYLVAPVSGMLLGALCNKAV
BRDIST1230FGPLLTGLLVGANTIAGGAWVYWVGPLAGGPLAVAVYEFV
BRDIST1231LGPLLVGLVVGANALAGGPWVYWVGPMIGGLLAGLVYDGV
BRDIST1232YGPMLTGLIVGANTLAGGNWVYWVGPLVGGPLAGFVYESL
BRDIST1233LAGLAVGATVLLNVLFAGPWVYIVGPVGGAVAGAWAYNLI
BRDIST1234IAPIAIGFIVGANILAAGPWVYWVGPLIGGGLAGLVYGDV
BRDIST1236LAPLPIGFAVFLVHLATIPWIFWVGPFIGAALAAIYHVVV
BRDIST1237LAGLAVGSSVCITSIFAGAWLYFLGPILGTLSGAWTYTFI
BRDIST1238LIAVAVGATVVMNILIAGPWIYLMATPLGAIAGAGAYVAI
BRDIST1239LVAVAAGAAVMMNALVSAEWIYMLAPPLGAISGTGAYIAL
BRDIST1240LAPLLIGFSVFVVHLATIPWIFWVGPFTGAAVAMVYHQFV
BRDIST1241LAGLAVGATILLNVLIAGPWVYVVGPVAGAVAGAWSYNLI
BRDIST1242IGPLAVGFLLGANMLAGGPWVYWVGPFLGAGIAGLLYEYL
BRDIST1243LAGIAVGAAVTLNILIAGPWIYLVAPTLGAVAGAGVYTAV
BRDIST1244LAPLPIGFAVFMVHLATIPWIFWVGPLIGAAIAAAYHQYV
BRDIST1245LQPLPIGFAVFVVHLATIPWIFWVGPFVGATVAALYHQCV
BRDIST1246LKTAMLSVSTVSLVLAGAAYVYWICPFVGATLAAWTFRAV
BRDIST1247LVPLPIGFAVFVVHLATIPWIFWVGPLLGATVAAFYHRFV
BRDIST1248LLGLAVGATIVMNILVAGPWVYLVAQPLGALAGMGAYVTI
BRDIST1249LAPLPIGFAVFMVHLATIPWIFWVGPFIGAAIAAAYHQYV
BRDIST1250LAPLPIGFAVFMVHLATIPWIFWVGPFIGAAIAAAYHQYV
BRDIST1251IAPVAIGFVLGANILTGGPWVYWVGPMIGAGLAGALYEFV
BRDIST1252IAPIAIGFIVGANILAAGPWVYWVGPLIGGGLAGLVYGDV
BRDIST1253LAPLPIGFAVFLVHLATIPWIFWVGPFIGAALAAVYHQVV
BRDIST1254MGSLVVGLVAGACVLAAGSAVYWVGPMIGAAVAALVHQNL

Protein
Loop B
Loop E
1J4N
AHLNPAVTLGLLLS
GCGINPARSFGSSVIT
1FX8
AHLNPAVTIALWLF
GFAMNPARDFGPKVFA
1RC2
GHFNPAVTIGLWAG
NTSVNPARSTAVAI-F
1Z98
GHINPAVTFGLFLA
GTGINPARSFGAAVIF
2B60
AHVNPAVTFAFLVG
GAGMNPARSFAPAILT
2F2B
CHINPAVTIGLWSV
GSSLNPARTFGPYLND
BRDIST1218GHVNPAVTFGAFLGGASMNPAVSFGPALVS
BRDIST1219GHVNPAVTFGAFLGGASMNPAVSFGPALVS
BRDIST1220GHVNPAVTFGAFLGGASMNPAVSFGPALVS
BRDIST1221GHVNPAVTFGAFLGGASMNPAVSFGPALVS
BRDIST1222GHVNPAVTFGAFLGGASMNPAVSFGPALVS
BRDIST1223GHINPAVTFALLLAGTGINPARSLGAAVAY
BRDIST1224AHMNPAVSLGFAIAGASMNPARSIGPALVG
BRDIST1225GHINPAVTFGLFLAGTGINPARSLGAAVIF
BRDIST1226GHINPAVTFGLFLAGTGINPARSLGAAVVY
BRDIST1227AHMNPAVTLSFACFGGSMNPARTLAPAVAS
BRDIST1228GHVNPAVTFGAFIGGASMNPAVSFGPAVVS
BRDIST1229AHLNPAVTLTFAAFGGSMNPVRSLGPAIVM
BRDIST1230AHMNPAVTLSLAVGGASMNPARSFGPALAS
BRDIST1231GHINPAVTLGLAAGGASMNPARSFGPALVT
BRDIST1232GHLNPAVTLALLARGASMNPARSFGPALAT
BRDIST1233AHFNPAVTFAFATCGASMNPARTLGPAMVA
BRDIST1234GHLNPAVTFGLAVGGGSMNPARSFGPAVAA
BRDIST1236GHINPAVTFGLFLAGTGINPARSLGAAIIY
BRDIST1237AHMNPAVTTAFAVFGGSMNPARTLGPALAS
BRDIST1238CHLNPAVSIAMAVFGASMNPARTIGPAIVT
BRDIST1239AHLNPAVSIAMAVFGGSMNPARTLGPAIAT
BRDIST1240GHINPAVTFGLLLAGTSINPARSFGPAVVY
BRDIST1241AHFNPAVTFAFATVGASMNPARTVGPALVG
BRDIST1242GHVNPAITFGALLGGAGMNPARVFGPALVG
BRDIST1243AHLNPSLTIAFAALGGSMNPVRTLGPAVAA
BRDIST1244GHINPAVTFGLFLAGTGINPARSLGAAVIY
BRDIST1245GHMNPAVTFGMLVGGTGINPARSLGAAVMY
BRDIST1246ASFNPTALAAFYAAGPSMNPANAFGWAYVN
BRDIST1247GHINPAVTFGLLVGGTGINPARSLGAAVMY
BRDIST1248CHMNPAVSITMAVFGASMNPARTIGPAIVT
BRDIST1249GHINPAVTFGLFLAGTGINPARSLGAAVIY
BRDIST1250GHINPAVTFGLFLAGTGINPARSLGAAVIY
BRDIST1251GHVNPAVTFGVLVGGAAMNPARAFGPALVG
BRDIST1252GHLNPAVTFGLAVGGGSMNPARSFGPAVAA
BRDIST1253GHINPAVTFGLFLAGTGINPARSLGAAIIY
BRDIST1254GHVNPAVTFALAIGGASMNPARSFGPAVVS
 
 
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur