MIPModDB@IITKanpur



	MIPModDB

VACULI1468

ACCESSION NUMBER

: ELA47012.1

ORGANISM

: Vavraia culicis subsp. floridensis

ANNOTATION

: hypothetical protein VCUG_01543

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by NEEDLE program from EMBOSS Package)
	from	to	1J4N	1FX8	2F2B
252	5	250	40.9	35.4	39.7

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
IGGI	NPA	NPG	1.9	1.9	1.8

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Radius profile along the channel

Last Updated:
Best Viewed at 1024X768 resolution on IE 5.0+, Firefox 1.0+

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur