MIPModDB@IITKanpur



	MIPModDB

PSHUBE1442

ACCESSION NUMBER

: GAC94525.1

ORGANISM

: Pseudozyma hubeiensis SY62

ANNOTATION

: hypothetical protein PHSY_002097

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by NEEDLE program from EMBOSS Package)
	from	to	1J4N	1FX8	2F2B
393	77	332	37.1	41	37.5

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
YVVR	HPA	NSA	2.1	1.8	1.7

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Radius profile along the channel

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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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