MIPModDB
 
 

LASAKE0047

    ACCESSION NUMBER : YP_396456

    ORGANISM : Lactobacillus sakei subsp. sakei 23K
    ANNOTATION : Aquaporine Z


GENE STRUCTURE


    Exons      Introns   Helix start position   Loop B and Loop E start position

SEQUENCE BASED INFORMATION


Length of sequence Length modeled Similarity with templates
(as calculated by NEEDLE program from EMBOSS Package)
  from to 1J4N 1FX8 2F2B
217 1 214 48 48.6 51

STRUCTURE BASED INFORMATION


Residues in selectivity filter NPA motif Root mean squared deviation with templates
(as calculated by DALI program)
  I II 1J4N 1FX8 2F2B
FIGR NPA NPA 1.6 1.5 1.3


View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N
Downloads:

Alignment in PIR Format
Alignment in PAP Format

Modelled Structure in PDB Format
Radius profile along the channel
 
 
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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