MIPModDB
 
 

LAPLAN0678

    ACCESSION NUMBER :

    ORGANISM : Lactobacillus plantarum
    ANNOTATION : Glycerol uptake facilitator protein GlpF
    UNIPROT ACCESSION : Q890C5


GENE STRUCTURE

Gene structure for this protein is not available

    Exons      Introns   Helix start position   Loop B and Loop E start position

SEQUENCE BASED INFORMATION


Length of sequence Length modeled Similarity with templates
(as calculated by NEEDLE program from EMBOSS Package)
  from to 1J4N 1FX8 2F2B
238 1 238 37.1 48.5 43.7

STRUCTURE BASED INFORMATION


Residues in selectivity filter NPA motif Root mean squared deviation with templates
(as calculated by DALI program)
  I II 1J4N 1FX8 2F2B
WGFR NPA NLA 2 1.4 1.7


View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N
Downloads:

Alignment in PIR Format
Alignment in PAP Format

Modelled Structure in PDB Format
Radius profile along the channel
 
 
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
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