MIPModDB@IITKanpur



	MIPModDB

GLINTR1503

ACCESSION NUMBER

: JQ412059

ORGANISM

: Glomus intraradices

ANNOTATION

GENE STRUCTURE

Exons

Introns

Helix start position

Loop B and Loop E start position

SEQUENCE BASED INFORMATION

Length of sequence	Length modeled		Similarity with templates (as calculated by NEEDLE program from EMBOSS Package)
	from	to	1J4N	1FX8	2F2B
276	6	228	44.5	42.7	48

View FASTA sequence

STRUCTURE BASED INFORMATION

Residues in selectivity filter	NPA motif		Root mean squared deviation with templates (as calculated by DALI program)
	I	II	1J4N	1FX8	2F2B
FAAR	NPS	NPA	1.6	1.5	1.7

Structure based alignment

View:

Structure superimposed with 1FX8
Structure superimposed with 1J4N

Downloads:

Alignment in PIR Format
Alignment in PAP Format
Modelled Structure in PDB Format
Radius profile along the channel

Last Updated:
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Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering,
Indian Institute of Technology, Kanpur, INDIA-208016
Copyright (c) 2007 All rights reserved, IIT Kanpur